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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9399405_9403085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9399405 - 9403085

Intron Length:

3681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

TGGTCAGTAATT

Flanking Amino Acid:

QLETGTEAEKAKLKSFAAKI

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

67.7

0.44

58.3

38.4

Major PPT

80.6

0.69

0.8

73.3

37.2

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

50.2

0.08

2.2

73.76

43.2

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187

ENSAPLT00000005386

9389214 - 9433118

43905