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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9403215_9409602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9403215 - 9409602

Intron Length:

6388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

GTTATGCTACTT

Flanking Amino Acid:

LVPTMDYYPDRTYIFTFLLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.3

81.8

38.5

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

75.2

0.57

0.8

68.7

31.8

Minor 5ss

40.7

-1

2.8

50.8

Minor BPS

-0.6

2.4

61.39

42.8

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187

ENSAPLT00000005386

9389214 - 9433118

43905