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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9409783_9433100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9409783 - 9433100

Intron Length:

23318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CCCACTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

CTCTCCCCACTT

Flanking Amino Acid:

MLLPTPETMPQTPIFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

32.6

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

74.8

0.56

0.8

68.3

31.8

Minor 5ss

-1

2.7

51.5

44.9

Minor BPS

45.1

-0.2

2.1

64.35

46.4

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005386

9389214 - 9433118

43905