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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9409783_9434358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9409783 - 9434358

Intron Length:

24576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCCACTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

CTCTCCCCACTT

Flanking Amino Acid:

LCNAAVKKCKETMPQTPIFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

74.8

0.56

0.8

68.3

31.8

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

45.1

-0.2

2.1

64.35

46.4

Associated Gene:

Gene:

RASGEF1A

Ensembl Gene ID:

ENSAPLG00000005188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033990

9389214 - 9434400

45187