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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9664898_9665475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9664898 - 9665475

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TTCAGTACAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

79.9

0.67

77.1

37.1

Minor 5ss

37.7

-1.4

3.1

48.6

47.2

Minor BPS

39.9

-0.6

2.1

59.04

43.9

Associated Gene:

Gene:

MBL2

Ensembl Gene ID:

ENSAPLG00000005476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005661

9664769 - 9673144

8376