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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9695085_9698972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9695085 - 9698972

Intron Length:

3888

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCATGTTCC

5'SS Class:

major

3'SS Sequence:

GAAATCTATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

AGACTTTGAAAT

Flanking Amino Acid:

GDDFEVMNVDLATGHTFPFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

69.4

39.8

Major BPS

74.8

0.62

39.8

Major PPT

62.1

0.27

1.1

51.6

46.7

Minor 5ss

39.7

-1.2

3.9

57.6

40.2

Minor BPS

47.5

-0.1

1.4

59.78

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039558

9694866 - 9699014

4149