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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9727605_9729767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9727605 - 9729767

Intron Length:

2163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGAATC

5'SS Class:

major

3'SS Sequence:

TTTACTGAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTACTGAATT

Flanking Amino Acid:

SGRFVIGGPQGDAGVTGRKI

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.2

72.8

36.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.32

41.7

Minor 5ss

40.5

-1.1

2.8

52.6

44.2

Minor BPS

72.2

0.78

1.6

90.26

33.2

Associated Gene:

Gene:

MAT1A

Ensembl Gene ID:

ENSAPLG00000005651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025063

9725457 - 9742809

17353

ENSAPLT00000005875

9722318 - 9742809

20492