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Intron Name: Anas_platyrhynchos_platyrhynchos_6_9735203_9742649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9735203 - 9742649

Intron Length:

7447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGATGTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGAATAACA

Flanking Amino Acid:

TSESVGEGHPDKICDQISDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.6

0.6

69.7

41.3

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

53.5

0.11

2.3

77.79

38.6

Associated Gene:

Gene:

MAT1A

Ensembl Gene ID:

ENSAPLG00000005651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025063

9725457 - 9742809

17353

ENSAPLT00000005875

9722318 - 9742809

20492