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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10105418_10106897_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10105418 - 10106897

Intron Length:

1480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

AAAAAGAAAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGAAT

U12 Branch Point Sequence:

ATGACTAGGAAA

Flanking Amino Acid:

NCAPGKPLPKKSSPSYSISP

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

62.9

0.32

1.5

72.3

40.4

Major PPT

37.4

-0.7

1.6

22.8

34.3

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

40.6

-0.7

1.7

48.1

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017920

10105358 - 10107353

1996