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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10239653_10240552_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10239653 - 10240552

Intron Length:
900

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGTGAA

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
TGTCCCTCACCA

Flanking Amino Acid:
EALQVFKEARGRARSLLSLC

Intron Amino Acid Position:
298

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.7
0.86
0.9
77.6
32.8

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
92.3
0.95
0.6
88.3
21.5

Minor 5ss
31.6
-2.1
3.1
31.7
42.6

Minor BPS
55.7
0.18
1.9
70.34
41.4

Associated Gene:

Gene:
ASB1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10228393 - 10240686
12294