About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_10383515_10383590_R


Intron Information:

Intron Rank:
152108

Intron Class:
major

Intron Phase:

Intron Coordinates:
10383515 - 10383590

Intron Length:
76

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATACATG

5'SS Class:
major

3'SS Sequence:
TCTCCATCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAG

U12 Branch Point Sequence:
TATTGCTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1
67.7
43.2

Major BPS
76
0.65
1.5
85.7
34.9

Major PPT
79.8
0.67
0.8
73.6
30.1

Minor 5ss
48.4
-0.1
2.7
65.5
45.8

Minor BPS
69.8
0.62
1.8
79.46
36.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10383412 - 10384841
1430