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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1046718_1066759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1046718 - 1066759

Intron Length:

20042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGTGCGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TGATCCCTGACT

Flanking Amino Acid:

SFAWNITVLKGQGDLLKNAK

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

69.8

0.45

65.7

40.9

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

66.6

0.6

1.7

82.18

38.6

Associated Gene:

Gene:

PLCL1

Ensembl Gene ID:

ENSAPLG00000006530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034131

1046535 - 1085165

38631

ENSAPLT00000006774

1046535 - 1225703

179169