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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10472230_10481076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10472230 - 10481076

Intron Length:

8847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTC

5'SS Class:

strong_major

3'SS Sequence:

AATTCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CATTGTTCAATT

Flanking Amino Acid:

MGDTEYLTAFRTVVMPIANE

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

77.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

76.6

0.6

69.9

40.5

Minor 5ss

42.6

-0.8

3.1

59.6

Minor BPS

49.7

0.06

68.76

42.9

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625