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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10481175_10484702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10481175 - 10484702

Intron Length:

3528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTATGTGTAACT

Flanking Amino Acid:

NVSKILIVDWVGTGAGVGFN

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

89.1

0.88

0.6

87.7

22.4

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

48.9

-0

2.4

73.14

43.8

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004612

10461717 - 10667022

205306