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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10483387_10484702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10483387 - 10484702

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCCGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CCTCCCTCATAT

Flanking Amino Acid:

NVSKILIVDWDVHHGNGTQQ

Intron Amino Acid Position:

866

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

0.72

78.4

31.2

Major PPT

64.2

0.32

64.4

31.4

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

46.7

-0.1

1.9

62.97

46.6

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686