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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10484791_10485729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10484791 - 10485729

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCATCACCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATCACCT

Flanking Amino Acid:

PGHHAEESTPMGFCYFNSVA

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.8

0.56

0.9

70.9

34.7

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

51.6

0.13

2.1

77.41

44.7

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625