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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10485786_10486336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10485786 - 10486336

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTGTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTT

Flanking Amino Acid:

VFKVATGELKNGFAVVRPPG

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

73.9

42.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.9

0.7

0.9

76.5

37.5

Minor 5ss

34.3

-1.8

2.9

42.3

44.5

Minor BPS

68.8

0.67

1.6

82.89

39.2

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625