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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10486445_10494623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10486445 - 10494623

Intron Length:

8179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTGCCTCTAACC

Flanking Amino Acid:

FVRLPCGGVGVDSDTIWNEV

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

64.8

0.33

1.1

63.7

42.2

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

54.6

0.12

1.7

64.23

41.5

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686