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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10494671_10499206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10494671 - 10499206

Intron Length:

4536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGACTTAGTG

Flanking Amino Acid:

RQKLDSKKLLGSLTSMFVRL

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

93.2

0.97

0.6

89.1

19.8

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

52.6

-0

1.9

64.18

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839