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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10505413_10512160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10505413 - 10512160

Intron Length:

6748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GTTCCTTTCACT

Flanking Amino Acid:

EPPTKPRFTTGLVYDTLMLK

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.5

0.9

65.3

35.6

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

65.1

0.56

1.8

82.13

39.2

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618