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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10512348_10513984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10512348 - 10513984

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAG

U12 Branch Point Sequence:

CATTCAGTAGCT

Flanking Amino Acid:

QAEQELLFRQQALLLEQQRI

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

55.9

0.15

1.5

39.8

Major PPT

78.7

0.65

0.7

72.6

25.7

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

46.2

-0.2

2.4

70.36

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686