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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10528902_10528987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10528902 - 10528987

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TGTGTGTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TATCCCTTAATC

Flanking Amino Acid:

LGLPATGPSSGGSAQQDAER

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.3

72.3

39.5

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

0.56

68.8

41.9

Minor 5ss

35.3

-1.7

3.3

44.6

43.6

Minor BPS

80.1

0.93

1.1

81.47

32.1

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625