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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10533946_10536576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10533946 - 10536576

Intron Length:

2631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GGATGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGCTTGTAATG

Flanking Amino Acid:

ALKKRPLDVTDSACNSAPGS

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

62.7

0.29

1.1

58.3

47.1

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

47.4

-0.3

55.41

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625