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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10536709_10548746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10536709 - 10548746

Intron Length:

12038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTATTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

SKDDFPLRKTASEPNLKLRS

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.7

40.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.8

0.96

0.7

23.9

Minor 5ss

35.4

-1.7

3.4

50.6

45.9

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686