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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10554613_10558916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10554613 - 10558916

Intron Length:

4304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTGACATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CTGTTTTTGACA

Flanking Amino Acid:

QLKNKEKGKESAVASTEVKM

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.9

41.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

78.8

0.65

0.9

74.8

39.5

Minor 5ss

37.4

-1.4

2.7

42.4

38.3

Minor BPS

65.5

0.48

1.2

68.82

38.3

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625