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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10559068_10574849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10559068 - 10574849

Intron Length:

15782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CCCTTCTCCACA

Flanking Amino Acid:

HEAQLHEHIKQQQEMLAMKH

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

84.4

0.85

34.5

Major PPT

0.61

0.7

71.3

26.8

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

46.5

-0.2

54.1

45.1

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000019634

10461337 - 10608961

147625

ENSAPLT00000017922

10461337 - 10639175

177839

ENSAPLT00000004612

10461717 - 10667022

205306

ENSAPLT00000040949

10461337 - 10666954

205618