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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10608646_10608945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10608646 - 10608945

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGATGTGATAT

Flanking Amino Acid:

MNCCLDGLSGRDQPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

88.6

0.87

0.7

80.8

31.1

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

39.2

-0.7

2.2

58.3

44.4

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019634

10461337 - 10608961

147625