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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10608646_10666772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10608646 - 10666772

Intron Length:

58127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGATGTGATAT

Flanking Amino Acid:

LLAMSSQSHPDGLSGRDQPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

88.6

0.87

0.7

80.8

31.1

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

39.2

-0.7

2.2

58.3

44.4

Associated Gene:

Gene:

HDAC4

Ensembl Gene ID:

ENSAPLG00000004358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037315

10461337 - 10667022

205686

ENSAPLT00000004612

10461717 - 10667022

205306