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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1066870_1070938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1066870 - 1070938

Intron Length:

4069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TCAATCATACAG

Flanking Amino Acid:

HDKIVQCQKAGMEFHEELHN

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

71.2

0.53

72.3

32.8

Major PPT

79.3

0.66

0.8

77.3

36.4

Minor 5ss

38.8

-1.3

53.4

43.7

Minor BPS

40.7

-0.8

1.9

42.72

Associated Gene:

Gene:

PLCL1

Ensembl Gene ID:

ENSAPLG00000006530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034131

1046535 - 1085165

38631

ENSAPLT00000006774

1046535 - 1225703

179169