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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1080424_1082495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1080424 - 1082495

Intron Length:

2072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCG

5'SS Class:

major

3'SS Sequence:

TTCCTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

AGTGGGCTAAGT

Flanking Amino Acid:

EATDMRENMQNAMVAVKELC

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

59.6

44.8

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

80.4

0.68

0.7

73.1

31.8

Minor 5ss

37.2

-1.5

3.2

47.9

47.8

Minor BPS

35.5

-1

2.6

55.26

46.5

Associated Gene:

Gene:

PLCL1

Ensembl Gene ID:

ENSAPLG00000006530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006774

1046535 - 1225703

179169