Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_10839450_10845035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10839450 - 10845035

Intron Length:

5586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCTTGCCGAAGT

Flanking Amino Acid:

YDKIYYEFRSDQGLPFHFLF

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

87.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

82.2

0.72

0.8

81.2

36.5

Minor 5ss

37.9

-1.4

2.9

52.2

44.4

Minor BPS

44.7

-0.3

2.4

69.27

47.2

Associated Gene:

Gene:

NDUFA10

Ensembl Gene ID:

ENSAPLG00000004096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036382

10838774 - 10870544

31771