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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10868609_10869456_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10868609 - 10869456

Intron Length:
848

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACATCTT

5'SS Class:
major

3'SS Sequence:
TCTTTTTTGTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AACTTAC

U12 Branch Point Sequence:
TCTTTTTTGTCA

Flanking Amino Acid:
KLAQKLAEKLGMKYFPEADI

Intron Amino Acid Position:
84

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
75.3
40.7

Major BPS
64.9
0.37
0.9
55.4
32.3

Major PPT
86.3
0.82
0.9
87.9
29.4

Minor 5ss
38.4
-1.3
3.4
58.7
45.8

Minor BPS
45.2
-0.3
3.4
68.82
38.3

Associated Gene:

Gene:
NDUFA10

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10838774 - 10870544
31771

10832237 - 10870544
38308

10837167 - 10870544
33378