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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10885390_10885971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10885390 - 10885971

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TATGTCGTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTTAT

U12 Branch Point Sequence:

TCCCCGTTATGT

Flanking Amino Acid:

TVQNYLGFHQSDLIYQSIFE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

56.4

0.16

1.3

44.8

Major PPT

75.6

0.58

65.9

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

42.7

-0.4

2.4

60.49

48.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039722

10872982 - 10890327

17346