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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10887108_10887256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10887108 - 10887256

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

ACCGCCTCCATG

Flanking Amino Acid:

MMHCAEKHVRMMKTGESGLT

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

60.1

0.25

35.6

Major PPT

69.3

0.44

0.9

60.6

35.2

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

41.9

-0.7

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039722

10872982 - 10890327

17346