Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_10904034_10904145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10904034 - 10904145

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGCCTCTCATCT

Flanking Amino Acid:

LDFTPLACDAKGKIVLGYTE

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

84.9

0.79

0.7

80.1

25.2

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

48.3

-0

1.8

66.13

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022450

10897205 - 10907894

10690