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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10904714_10905296_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10904714 - 10905296

Intron Length:
583

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTGAGTGCT

5'SS Class:
major

3'SS Sequence:
TCCTGCTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCACAT

U12 Branch Point Sequence:
ACATACAGACCG

Flanking Amino Acid:
EYILVTQRPLVDEEGGEHLR

Intron Amino Acid Position:
377

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
67.9
37.3

Major BPS
62.5
0.31
1.2
69
38.9

Major PPT
79
0.65
0.8
72.7
32.1

Minor 5ss
31.9
-2.1
3.3
42.4
44.3

Minor BPS
39
-0.9
2
41.79
42.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10897205 - 10907894
10690