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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10934109_10934195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10934109 - 10934195

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTCC

5'SS Class:

major

3'SS Sequence:

GCTTCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTAAC

U12 Branch Point Sequence:

CCGTGGGTAACC

Flanking Amino Acid:

MRPRCPPRWLPLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

63.2

38.2

Major BPS

46.7

-0.2

1.4

47.1

44.6

Major PPT

72.7

0.51

0.8

65.9

30.2

Minor 5ss

40.2

-1.1

2.9

52.1

44.7

Minor BPS

38.4

-0.9

2.7

48.81

47.7

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629