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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10947097_10951327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10947097 - 10951327

Intron Length:

4231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGCTC

5'SS Class:

major

3'SS Sequence:

CCTCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGGTTGTCACCG

Flanking Amino Acid:

SPQKLAAARPENLSAEVSLL

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

60.6

44.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

74.6

0.55

0.7

68.7

24.9

Minor 5ss

-1.8

3.7

50.1

46.5

Minor BPS

40.6

-0.8

2.3

47.42

45.8

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019431

10946619 - 10961530

14912