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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10951873_10953783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10951873 - 10953783

Intron Length:

1911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CGGTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

TCGTCCCGCACC

Flanking Amino Acid:

AGGADPDKYQGVIADLKLRG

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

45.8

-0.3

2.2

59.75

45.1

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629