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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10954225_10954305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10954225 - 10954305

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

CCTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAC

U12 Branch Point Sequence:

GCACCCAGAGCG

Flanking Amino Acid:

AEERLRVPAGGPKGEKGEKG

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

46.4

-0.2

1.4

53.6

41.6

Major PPT

71.1

0.48

0.9

64.6

36.5

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

40.5

-0.8

1.9

41.09

42.2

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629