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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10954404_10954500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10954404 - 10954500

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TGACACGCACCC

Flanking Amino Acid:

LGTGSTKGEKGQKGELGTKG

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

78.5

0.64

0.8

73.2

31.7

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

36.6

-1

2.3

47.11

41.3

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629