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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10954528_10954639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10954528 - 10954639

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTGGAT

U12 Branch Point Sequence:

CACACGTGGATG

Flanking Amino Acid:

KGQKGELGTKGSAGFGYPGS

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

47.6

-0.1

1.5

46.5

Major PPT

73.8

0.54

0.8

36.4

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

38.6

-1

2.1

36.18

39.8

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912