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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10954820_10954928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10954820 - 10954928

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTTGA

5'SS Class:

major

3'SS Sequence:

TTGCCATCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CCCCGCTGACCT

Flanking Amino Acid:

EGPPGRDGEPGDPGEDGKPG

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

62.3

40.8

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

67.2

0.39

0.9

59.1

37.2

Minor 5ss

-1.6

2.9

44.7

43.5

Minor BPS

41.7

-0.5

2.1

53.41

47.7

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912