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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10954956_10955033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10954956 - 10955033

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CCCCCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

GCCCCTGCACCT

Flanking Amino Acid:

PGDPGEDGKPGVMGPQGFPG

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

73.1

43.9

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

77.9

0.63

0.7

71.5

26.4

Minor 5ss

39.3

-1.2

2.9

56.1

41.4

Minor BPS

37.6

-0.8

2.2

49.55

44.2

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629