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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10955445_10955522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10955445 - 10955522

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

GACACCTTCAGT

Flanking Amino Acid:

GFGGDLETVRGPRGPPGPPG

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

64.7

0.37

1.2

39.8

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

47.4

-0.1

2.1

62.49

46.9

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912