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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10955673_10955780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10955673 - 10955780

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GGGCATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACCAC

U12 Branch Point Sequence:

ATTCCCCCACCC

Flanking Amino Acid:

DGVPGTPGPEGPQGPPGKDG

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

45.7

-0.2

1.1

50.5

33.7

Major PPT

66.6

0.37

42.8

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

46.2

-0.3

2.1

63.8

41.1

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629