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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10956353_10956435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10956353 - 10956435

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CACGGCTCAGCC

Flanking Amino Acid:

PPGPAYEAGFADMEGSGLPL

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

66.9

40.1

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

73.3

0.52

0.9

36.3

Minor 5ss

35.5

-1.6

3.2

45.6

36.6

Minor BPS

39.3

-0.8

2.1

43.14

44.3

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912