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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10956508_10956602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10956508 - 10956602

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GTCCCCTTGTCC

Flanking Amino Acid:

PGPRGPDGPQGVPGLPGIKG

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

71.6

40.9

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

73.5

0.53

66.3

40.8

Minor 5ss

39.7

-1.2

2.8

50.2

Minor BPS

44.2

-0.4

3.4

64.12

41.6

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912