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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10956675_10956765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10956675 - 10956765

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

CTCCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TGCATCTCACCC

Flanking Amino Acid:

PGQPGVPGPKGDAGVPGVDG

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

41.5

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

81.4

0.71

0.7

72.6

32.1

Minor 5ss

29.4

-2.4

3.5

38.7

46.6

Minor BPS

46.4

-0.2

1.8

55.56

42.6

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912