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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10956829_10956938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10956829 - 10956938

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGCG

5'SS Class:

major

3'SS Sequence:

CTTCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTCCCCATCACT

Flanking Amino Acid:

PGLEGFPGPQGPKGDRGSPG

Intron Amino Acid Position:

816

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

54.3

43.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

83.1

0.74

0.7

76.9

Minor 5ss

34.9

-1.7

3.6

47.8

47.9

Minor BPS

49.6

0.05

2.1

71.33

44.9

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912